[00:00:00] =>> Building science/netcdf [00:00:00] build started at 2026-04-05T14:40:25+02:00 [00:00:00] port directory: /usr/ports/science/netcdf [00:00:00] package name: netcdf-4.9.3 [00:00:00] building for: FreeBSD pkg.mfl.dk 15.0-RELEASE-p1 FreeBSD 15.0-RELEASE-p1 amd64 [00:00:00] maintained by: sunpoet@FreeBSD.org [00:00:00] port version: 4.9.3 [00:00:00] port revision: 0 [00:00:00] Makefile datestamp: Mar 28 22:30:35 2026 [00:00:00] Ports top last git commit: d97c3e4443ad61b23779d05af9d403a52c50f501 [00:00:00] Ports top unclean checkout: no [00:00:00] =>> Inspecting /usr/local/poudriere/data/.m/150amd64-local/ref//usr/ports/science/netcdf for modifications to git checkout... no [00:00:00] Port dir unclean checkout: no [00:00:00] Poudriere version: poudriere-git-3.4.99.20260303 [00:00:00] Host OSVERSION: 1500068 [00:00:00] Jail OSVERSION: 1500068 [00:00:00] Builder Id: 05 [00:00:00] Builder jail path: /usr/local/poudriere/data/.m/150amd64-local/05 [00:00:00] Ref jail path: /usr/local/poudriere/data/.m/150amd64-local/ref [00:00:00] Job Idx: 10 [00:00:00] Jail Id (no networking) : 60 [00:00:00] Jail Name (no networking): 150amd64-local-job-05 [00:00:00] Jail Id (networking) : 65 [00:00:00] Jail Name (networking) : 150amd64-local-job-05-n [00:00:00] [00:00:00] ---Begin Environment--- [00:00:00] SHELL=/bin/sh [00:00:00] OSVERSION=1500068 [00:00:00] UNAME_v=FreeBSD 15.0-RELEASE-p1 [00:00:00] UNAME_r=15.0-RELEASE-p1 [00:00:00] BLOCKSIZE=K [00:00:00] MAIL=/var/mail/root [00:00:00] MM_CHARSET=UTF-8 [00:00:00] LANG=C.UTF-8 [00:00:00] STATUS=1 [00:00:00] HOME=/root [00:00:00] PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin [00:00:00] MAKE_OBJDIR_CHECK_WRITABLE=0 [00:00:00] LOCALBASE=/usr/local [00:00:00] USER=root [00:00:00] POUDRIERE_NAME=poudriere-git [00:00:00] POUDRIERE_VERSION=3.4.99.20260303 [00:00:00] LC_COLLATE=C [00:00:00] POUDRIERE_BUILD_TYPE=bulk [00:00:00] PACKAGE_BUILDING=yes [00:00:00] SAVED_TERM=tmux-256color [00:00:00] OUTPUT_REDIRECTED_STDERR=4 [00:00:00] OUTPUT_REDIRECTED=1 [00:00:00] PWD=/usr/local/poudriere/data/.m/150amd64-local/05/.p [00:00:00] OUTPUT_REDIRECTED_STDOUT=3 [00:00:00] P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS [00:00:00] MASTERNAME=150amd64-local [00:00:00] OLDPWD=/usr/local/poudriere/data/.m/150amd64-local/ref/.p/pool [00:00:00] POUDRIERE_PKGNAME=poudriere-git-3.4.99.20260303 [00:00:00] PREFIX=/usr/local [00:00:00] POUDRIEREPATH=/usr/local/bin/poudriere [00:00:00] ---End Environment--- [00:00:00] [00:00:00] ---Begin Poudriere Port Flags/Env--- [00:00:00] PORT_FLAGS= [00:00:00] PKGENV= [00:00:00] FLAVOR= [00:00:00] MAKE_ARGS= [00:00:00] ---End Poudriere Port Flags/Env--- [00:00:00] [00:00:00] ---Begin OPTIONS List--- [00:00:00] ===> The following configuration options are available for netcdf-4.9.3: [00:00:00] DOCS=on: Build and/or install documentation [00:00:00] DOXYGEN=off: Build documentation with Doxygen [00:00:00] SZIP=on: SZIP support (required if HDF5 was built with SZIP) [00:00:00] ===> Use 'make config' to modify these settings [00:00:00] ---End OPTIONS List--- [00:00:00] [00:00:00] --MAINTAINER-- [00:00:00] sunpoet@FreeBSD.org [00:00:00] --End MAINTAINER-- [00:00:00] [00:00:00] --PORTVERSION-- [00:00:00] 4.9.3 [00:00:00] --End PORTVERSION-- [00:00:00] [00:00:00] --PORTREVISION-- [00:00:00] 0 [00:00:00] --End PORTREVISION-- [00:00:00] [00:00:00] --CONFIGURE_ARGS-- [00:00:00] --disable-filter-testing --disable-libxml2 --enable-byterange --enable-curl --enable-dap --enable-hdf5 --enable-logging --disable-doxygen --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} [00:00:00] --End CONFIGURE_ARGS-- [00:00:00] [00:00:00] --CONFIGURE_ENV-- [00:00:00] MAKE=/usr/local/bin/gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/netcdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/netcdf/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/netcdf/work/.cache HOME=/wrkdirs/usr/ports/science/netcdf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/netcdf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/netcdf/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 [00:00:00] --End CONFIGURE_ENV-- [00:00:00] [00:00:00] --MAKE_ENV-- [00:00:00] XDG_DATA_HOME=/wrkdirs/usr/ports/science/netcdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/netcdf/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/netcdf/work/.cache HOME=/wrkdirs/usr/ports/science/netcdf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/netcdf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/netcdf/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-fPIC -DPIC -isystem /usr/local/include" LDFLAGS=" " LIBS="-lexecinfo -lsz -L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" [00:00:00] --End MAKE_ENV-- [00:00:00] [00:00:00] --PLIST_SUB-- [00:00:00] PORTDOCS="" DOCS="" NO_DOCS="@comment " DOXYGEN="@comment " NO_DOXYGEN="" SZIP="" NO_SZIP="@comment " OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/netcdf" EXAMPLESDIR="share/examples/netcdf" DATADIR="share/netcdf" WWWDIR="www/netcdf" ETCDIR="etc/netcdf" [00:00:00] --End PLIST_SUB-- [00:00:00] [00:00:00] --SUB_LIST-- [00:00:00] DOCS="" NO_DOCS="@comment " DOXYGEN="@comment " NO_DOXYGEN="" SZIP="" NO_SZIP="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/netcdf DOCSDIR=/usr/local/share/doc/netcdf EXAMPLESDIR=/usr/local/share/examples/netcdf WWWDIR=/usr/local/www/netcdf ETCDIR=/usr/local/etc/netcdf [00:00:00] --End SUB_LIST-- [00:00:00] [00:00:00] ---Begin make.conf--- [00:00:00] USE_PACKAGE_DEPENDS=yes [00:00:00] BATCH=yes [00:00:00] WRKDIRPREFIX=/wrkdirs [00:00:00] PORTSDIR=/usr/ports [00:00:00] PACKAGES=/packages [00:00:00] DISTDIR=/distfiles [00:00:00] FORCE_PACKAGE=yes [00:00:00] PACKAGE_BUILDING=yes [00:00:00] PACKAGE_BUILDING_FLAVORS=yes [00:00:00] #### /usr/local/etc/poudriere.d/make.conf #### [00:00:00] DEFAULT_VERSIONS+= ssl=openssl [00:00:00] DEFAULT_VERSIONS+= mysql=11.4m [00:00:00] DEFAULT_VERSIONS+= pgsql=17 [00:00:00] OPTIONS_SET+= LDAP [00:00:00] OPTIONS_SET+= QT6 [00:00:00] #OPTIONS_UNSET+= X11 [00:00:00] DEFAULT_VERSIONS+= php=8.4 [00:00:00] DEFAULT_VERSIONS+= samba=4.23 [00:00:00] graphics_cairo_UNSET+= XCB [00:00:00] x11-toolkits_gtk30_UNSET += ATK_BRIDGE COLORD [00:00:00] #ALLOW_UNSUPPORTED_SYSTEM= yes [00:00:00] CCACHE_DIR= /var/cache/ccache [00:00:00] WITH_CCACHE_BUILD= yes [00:00:00] #OVERLAYS+= /usr/local/share/sccache/overlay [00:00:00] #SCCACHE_DIR= /var/cache/ccache/sccache [00:00:00] [00:00:00] databases_redis_UNSET= PIE RELRO BIND_NOW [00:00:00] [00:00:00] WITHOUT_PIE_PORTS+= databases/redis [00:00:00] WITHOUT_RELRO_PORTS+= databases/redis [00:00:00] WITHOUT_BIND_NOW_PORTS+= databases/redis [00:00:00] WITH_CCACHE_BUILD=yes [00:00:00] CCACHE_DIR=/root/.ccache [00:00:00] #### Misc Poudriere #### [00:00:00] .include "/etc/make.conf.ports_env" [00:00:00] GID=0 [00:00:00] UID=0 [00:00:00] DISABLE_MAKE_JOBS=poudriere [00:00:00] ---End make.conf--- [00:00:00] --Resource limits-- [00:00:00] cpu time (seconds, -t) unlimited [00:00:00] file size (512-blocks, -f) unlimited [00:00:00] data seg size (kbytes, -d) 33554432 [00:00:00] stack size (kbytes, -s) 524288 [00:00:00] core file size (512-blocks, -c) unlimited [00:00:00] max memory size (kbytes, -m) unlimited [00:00:00] locked memory (kbytes, -l) unlimited [00:00:00] max user processes (-u) 58500 [00:00:00] open files (-n) 8192 [00:00:00] virtual mem size (kbytes, -v) unlimited [00:00:00] swap limit (kbytes, -w) unlimited [00:00:00] socket buffer size (bytes, -b) unlimited [00:00:00] pseudo-terminals (-p) unlimited [00:00:00] kqueues (-k) unlimited [00:00:00] umtx shared locks (-o) unlimited [00:00:00] pipebuf (-y) unlimited [00:00:00] --End resource limits-- [00:00:00] times start [shell] (user/sys/real): 0m0.018s 0m0.009s 9m33.000s [00:00:00] times start [child] (user/sys/real): 0m0.101s 0m0.101s 9m33.000s [00:00:00] =================================================== [00:00:00] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:00:00] ===> License BSD3CLAUSE accepted by the user [00:00:00] =========================================================================== [00:00:00] =================================================== [00:00:00] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:00:00] ===> netcdf-4.9.3 depends on file: /usr/local/sbin/pkg - not found [00:00:00] ===> Installing existing package /packages/All/pkg-2.6.2_1.pkg [00:00:00] [pkg.mfl.dk] Installing pkg-2.6.2_1... [00:00:00] [pkg.mfl.dk] Extracting pkg-2.6.2_1: .......... done [00:00:05] ===> netcdf-4.9.3 depends on file: /usr/local/sbin/pkg - found [00:00:05] ===> Returning to build of netcdf-4.9.3 [00:00:05] =========================================================================== [00:00:05] =================================================== [00:00:05] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:00:05] =========================================================================== [00:00:05] =================================================== [00:00:05] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:00:05] ===> License BSD3CLAUSE accepted by the user [00:00:05] ===> Fetching all distfiles required by netcdf-4.9.3 for building [00:00:05] =========================================================================== [00:00:05] =================================================== [00:00:05] ===== env: FETCH_REGET=0 NO_DEPENDS=yes USER=root UID=0 GID=0 [00:00:05] ===> License BSD3CLAUSE accepted by the user [00:00:05] ===> Fetching all distfiles required by netcdf-4.9.3 for building [00:00:05] => SHA256 Checksum OK for netcdf-c-4.9.3.tar.gz. [00:00:05] =========================================================================== [00:00:05] =================================================== [00:00:05] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:00:05] =========================================================================== [00:00:05] =================================================== [00:00:05] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:00:06] ===> License BSD3CLAUSE accepted by the user [00:00:06] ===> Fetching all distfiles required by netcdf-4.9.3 for building [00:00:06] ===> Extracting for netcdf-4.9.3 [00:00:06] => SHA256 Checksum OK for netcdf-c-4.9.3.tar.gz. [00:00:06] =========================================================================== [00:00:07] =================================================== [00:00:07] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:00:07] =========================================================================== [00:00:07] =================================================== [00:00:07] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:00:07] ===> Patching for netcdf-4.9.3 [00:00:07] =========================================================================== [00:00:07] =================================================== [00:00:07] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:00:07] ===> netcdf-4.9.3 depends on package: gmake>=4.4.1 - not found [00:00:07] ===> Installing existing package /packages/All/gmake-4.4.1.pkg [00:00:07] [pkg.mfl.dk] Installing gmake-4.4.1... [00:00:07] [pkg.mfl.dk] `-- Installing gettext-runtime-1.0... [00:00:07] [pkg.mfl.dk] | `-- Installing indexinfo-0.3.1_1... [00:00:07] [pkg.mfl.dk] | `-- Extracting indexinfo-0.3.1_1: .... done [00:00:07] [pkg.mfl.dk] `-- Extracting gettext-runtime-1.0: .......... done [00:00:07] [pkg.mfl.dk] Extracting gmake-4.4.1: .......... done [00:00:07] ===> netcdf-4.9.3 depends on package: gmake>=4.4.1 - found [00:00:07] ===> Returning to build of netcdf-4.9.3 [00:00:07] ===> netcdf-4.9.3 depends on file: /usr/local/bin/ccache - not found [00:00:07] ===> Installing existing package /packages/All/ccache-3.7.12_9.pkg [00:00:07] [pkg.mfl.dk] Installing ccache-3.7.12_9... [00:00:07] [pkg.mfl.dk] Extracting ccache-3.7.12_9: .......... done [00:00:07] Create compiler links... [00:00:07] create symlink for cc [00:00:07] create symlink for cc (world) [00:00:07] create symlink for c++ [00:00:07] create symlink for c++ (world) [00:00:07] create symlink for CC [00:00:07] create symlink for CC (world) [00:00:07] create symlink for clang [00:00:07] create symlink for clang (world) [00:00:07] create symlink for clang++ [00:00:07] create symlink for clang++ (world) [00:00:07] ===== [00:00:07] Message from ccache-3.7.12_9: [00:00:07] [00:00:07] -- [00:00:07] NOTE: [00:00:07] Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for [00:00:07] information on using ccache with FreeBSD ports and src. [00:00:07] ===> netcdf-4.9.3 depends on file: /usr/local/bin/ccache - found [00:00:07] ===> Returning to build of netcdf-4.9.3 [00:00:07] =========================================================================== [00:00:07] =================================================== [00:00:07] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:00:07] ===> netcdf-4.9.3 depends on shared library: libcurl.so - not found [00:00:08] ===> Installing existing package /packages/All/curl-8.19.0_1.pkg [00:00:08] [pkg.mfl.dk] Installing curl-8.19.0_1... [00:00:08] [pkg.mfl.dk] `-- Installing brotli-1.2.0,1... [00:00:08] [pkg.mfl.dk] `-- Extracting brotli-1.2.0,1: .......... done [00:00:08] [pkg.mfl.dk] `-- Installing libidn2-2.3.8... [00:00:08] [pkg.mfl.dk] | `-- Installing libunistring-1.4.2... [00:00:08] [pkg.mfl.dk] | `-- Extracting libunistring-1.4.2: .......... done [00:00:08] [pkg.mfl.dk] `-- Extracting libidn2-2.3.8: .......... done [00:00:08] [pkg.mfl.dk] `-- Installing libnghttp2-1.68.1... [00:00:08] [pkg.mfl.dk] `-- Extracting libnghttp2-1.68.1: .......... done [00:00:08] [pkg.mfl.dk] `-- Installing libpsl-0.21.5_2... [00:00:08] [pkg.mfl.dk] `-- Extracting libpsl-0.21.5_2: .......... done [00:00:08] [pkg.mfl.dk] `-- Installing libssh2-1.11.1,3... [00:00:08] [pkg.mfl.dk] | `-- Installing openssl-3.0.19,1... [00:00:08] [pkg.mfl.dk] | `-- Extracting openssl-3.0.19,1: .......... done [00:00:23] [pkg.mfl.dk] `-- Extracting libssh2-1.11.1,3: .......... done [00:00:23] [pkg.mfl.dk] `-- Installing openldap26-client-2.6.13... [00:00:24] [pkg.mfl.dk] | `-- Installing cyrus-sasl-2.1.28_5... [00:00:25] *** Added group `cyrus' (id 60) [00:00:26] *** Added user `cyrus' (id 60) [00:00:26] [pkg.mfl.dk] | `-- Extracting cyrus-sasl-2.1.28_5: .......... done [00:00:28] [pkg.mfl.dk] `-- Extracting openldap26-client-2.6.13: .......... done [00:00:28] [pkg.mfl.dk] `-- Installing zstd-1.5.7_1... [00:00:28] [pkg.mfl.dk] `-- Extracting zstd-1.5.7_1: .......... done [00:00:28] [pkg.mfl.dk] Extracting curl-8.19.0_1: .......... done [00:00:33] ===== [00:00:33] Message from cyrus-sasl-2.1.28_5: [00:00:33] [00:00:33] -- [00:00:33] You can use sasldb2 for authentication, to add users use: [00:00:33] [00:00:33] saslpasswd2 -c username [00:00:33] [00:00:33] If you want to enable SMTP AUTH with the system Sendmail, read [00:00:33] Sendmail.README [00:00:33] [00:00:33] NOTE: This port has been compiled with a default pwcheck_method of [00:00:33] auxprop. If you want to authenticate your user by /etc/passwd, [00:00:33] PAM or LDAP, install ports/security/cyrus-sasl2-saslauthd and [00:00:33] set sasl_pwcheck_method to saslauthd after installing the [00:00:33] Cyrus-IMAPd 2.X port. You should also check the [00:00:33] /usr/local/lib/sasl2/*.conf files for the correct [00:00:33] pwcheck_method. [00:00:33] If you want to use GSSAPI mechanism, install [00:00:33] ports/security/cyrus-sasl2-gssapi. [00:00:33] If you want to use SRP mechanism, install [00:00:33] ports/security/cyrus-sasl2-srp. [00:00:33] If you want to use LDAP auxprop plugin, install [00:00:33] ports/security/cyrus-sasl2-ldapdb. [00:00:33] ===== [00:00:33] Message from openldap26-client-2.6.13: [00:00:33] [00:00:33] -- [00:00:33] The OpenLDAP client package has been successfully installed. [00:00:33] [00:00:33] Edit [00:00:33] /usr/local/etc/openldap/ldap.conf [00:00:33] to change the system-wide client defaults. [00:00:33] [00:00:33] Try `man ldap.conf' and visit the OpenLDAP FAQ-O-Matic at [00:00:33] http://www.OpenLDAP.org/faq/index.cgi?file=3 [00:00:33] for more information. [00:00:33] ===> netcdf-4.9.3 depends on shared library: libcurl.so - found (/usr/local/lib/libcurl.so) [00:00:33] ===> Returning to build of netcdf-4.9.3 [00:00:33] ===> netcdf-4.9.3 depends on shared library: libhdf5.so - not found [00:00:33] ===> Installing existing package /packages/All/hdf5-1.12.2_2,1.pkg [00:00:33] [pkg.mfl.dk] Installing hdf5-1.12.2_2,1... [00:00:34] [pkg.mfl.dk] `-- Installing gcc14-14.2.0_4... [00:00:35] [pkg.mfl.dk] | `-- Installing binutils-2.44,1... [00:00:35] [pkg.mfl.dk] | `-- Extracting binutils-2.44,1: .......... done [00:00:38] [pkg.mfl.dk] | `-- Installing gmp-6.3.0... [00:00:38] [pkg.mfl.dk] | `-- Extracting gmp-6.3.0: .......... done [00:00:39] [pkg.mfl.dk] | `-- Installing mpc-1.4.0... [00:00:40] [pkg.mfl.dk] | | `-- Installing mpfr-4.2.2,1... [00:00:40] [pkg.mfl.dk] | | `-- Extracting mpfr-4.2.2,1: .......... done [00:00:40] [pkg.mfl.dk] | `-- Extracting mpc-1.4.0: .......... done [00:00:40] [pkg.mfl.dk] `-- Extracting gcc14-14.2.0_4: .........*** Signal 15 [00:02:00] Terminated