[00:00:00] =>> Building math/matio [00:00:00] build started at Mon Nov 4 15:15:17 CET 2024 [00:00:00] port directory: /usr/ports/math/matio [00:00:00] package name: matio-1.5.28 [00:00:00] building for: FreeBSD pkg.mfl.dk 14.1-RELEASE-p6 FreeBSD 14.1-RELEASE-p6 amd64 [00:00:00] maintained by: makc@FreeBSD.org [00:00:00] port version: 1.5.28 [00:00:00] port revision: 0 [00:00:00] Makefile datestamp: -rw-r--r-- 1 root wheel 661 Oct 31 19:56 /usr/ports/math/matio/Makefile [00:00:00] Ports top last git commit: 9bc872fbee04 [00:00:00] Ports top unclean checkout: no [00:00:00] =>> Inspecting /usr/local/poudriere/data/.m/141amd64-local/02//usr/ports/math/matio for modifications to git checkout... no [00:00:00] Port dir last git commit: 5e0e004c7d07 [00:00:00] Port dir unclean checkout: no [00:00:00] Poudriere version: poudriere-git-3.4.99.20240811 [00:00:00] Host OSVERSION: 1401000 [00:00:00] Jail OSVERSION: 1401000 [00:00:00] Job Id: 02 [00:00:00] [00:00:00] ---Begin Environment--- [00:00:01] SHELL=/bin/sh [00:00:01] OSVERSION=1401000 [00:00:01] UNAME_v=FreeBSD 14.1-RELEASE-p6 [00:00:01] UNAME_r=14.1-RELEASE-p6 [00:00:01] BLOCKSIZE=K [00:00:01] MAIL=/var/mail/root [00:00:01] MM_CHARSET=UTF-8 [00:00:01] LANG=C.UTF-8 [00:00:01] STATUS=1 [00:00:01] HOME=/root [00:00:01] PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin [00:00:01] MAKE_OBJDIR_CHECK_WRITABLE=0 [00:00:01] LOCALBASE=/usr/local [00:00:01] USER=root [00:00:01] POUDRIERE_NAME=poudriere-git [00:00:01] POUDRIERE_VERSION=3.4.99.20240811 [00:00:01] MASTERMNT=/usr/local/poudriere/data/.m/141amd64-local/ref [00:00:01] LC_COLLATE=C [00:00:01] POUDRIERE_BUILD_TYPE=bulk [00:00:01] PACKAGE_BUILDING=yes [00:00:01] SAVED_TERM=tmux-256color [00:00:01] OUTPUT_REDIRECTED_STDERR=4 [00:00:01] OUTPUT_REDIRECTED=1 [00:00:01] PWD=/usr/local/poudriere/data/.m/141amd64-local/02/.p [00:00:01] OUTPUT_REDIRECTED_STDOUT=3 [00:00:01] P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS [00:00:01] MASTERNAME=141amd64-local [00:00:01] OLDPWD=/usr/local/poudriere/data/.m/141amd64-local/ref/.p/pool [00:00:01] POUDRIERE_PKGNAME=poudriere-git-3.4.99.20240811 [00:00:01] PREFIX=/usr/local [00:00:01] POUDRIEREPATH=/usr/local/bin/poudriere [00:00:01] ---End Environment--- [00:00:01] [00:00:01] ---Begin Poudriere Port Flags/Env--- [00:00:01] PORT_FLAGS= [00:00:01] PKGENV= [00:00:01] FLAVOR= [00:00:01] MAKE_ARGS= [00:00:01] ---End Poudriere Port Flags/Env--- [00:00:01] [00:00:01] ---Begin OPTIONS List--- [00:00:01] ===> The following configuration options are available for matio-1.5.28: [00:00:01] HDF5=on: Support for MAT file version 7.3 [00:00:01] ===> Use 'make config' to modify these settings [00:00:01] ---End OPTIONS List--- [00:00:01] [00:00:01] --MAINTAINER-- [00:00:01] makc@FreeBSD.org [00:00:01] --End MAINTAINER-- [00:00:01] [00:00:01] --PORTVERSION-- [00:00:01] 1.5.28 [00:00:01] --End PORTVERSION-- [00:00:01] [00:00:01] --PORTREVISION-- [00:00:01] 0 [00:00:01] --End PORTREVISION-- [00:00:01] [00:00:01] --CONFIGURE_ARGS-- [00:00:01] --enable-mat73=yes --with-hdf5=/usr/local --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} [00:00:01] --End CONFIGURE_ARGS-- [00:00:01] [00:00:01] --CONFIGURE_ENV-- [00:00:01] XDG_DATA_HOME=/wrkdirs/usr/ports/math/matio/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/matio/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/matio/work/.cache HOME=/wrkdirs/usr/ports/math/matio/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/matio/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/matio/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 [00:00:01] --End CONFIGURE_ENV-- [00:00:01] [00:00:01] --MAKE_ENV-- [00:00:01] XDG_DATA_HOME=/wrkdirs/usr/ports/math/matio/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/matio/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/matio/work/.cache HOME=/wrkdirs/usr/ports/math/matio/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/matio/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/matio/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" [00:00:01] --End MAKE_ENV-- [00:00:01] [00:00:01] --PLIST_SUB-- [00:00:01] SHLIB_VER=13.0.1 OSREL=14.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/matio" EXAMPLESDIR="share/examples/matio" DATADIR="share/matio" WWWDIR="www/matio" ETCDIR="etc/matio" [00:00:01] --End PLIST_SUB-- [00:00:01] [00:00:01] --SUB_LIST-- [00:00:01] PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/matio DOCSDIR=/usr/local/share/doc/matio EXAMPLESDIR=/usr/local/share/examples/matio WWWDIR=/usr/local/www/matio ETCDIR=/usr/local/etc/matio [00:00:01] --End SUB_LIST-- [00:00:01] [00:00:01] ---Begin make.conf--- [00:00:01] USE_PACKAGE_DEPENDS=yes [00:00:01] BATCH=yes [00:00:01] WRKDIRPREFIX=/wrkdirs [00:00:01] PORTSDIR=/usr/ports [00:00:01] PACKAGES=/packages [00:00:01] DISTDIR=/distfiles [00:00:01] FORCE_PACKAGE=yes [00:00:01] PACKAGE_BUILDING=yes [00:00:01] PACKAGE_BUILDING_FLAVORS=yes [00:00:01] #### /usr/local/etc/poudriere.d/make.conf #### [00:00:01] OPTIONS_SET+=LDAP [00:00:01] OPTIONS_UNSET+=X11 [00:00:01] DEFAULT_VERSIONS+=php=8.1 [00:00:01] #ALLOW_UNSUPPORTED_SYSTEM=yes [00:00:01] CCACHE_DIR=/var/cache/ccache [00:00:01] WITH_CCACHE_BUILD=yes [00:00:01] WITH_CCACHE_BUILD=yes [00:00:01] CCACHE_DIR=/root/.ccache [00:00:01] #### Misc Poudriere #### [00:00:01] .include "/etc/make.conf.ports_env" [00:00:01] GID=0 [00:00:01] UID=0 [00:00:01] DISABLE_MAKE_JOBS=poudriere [00:00:01] ---End make.conf--- [00:00:01] --Resource limits-- [00:00:01] cpu time (seconds, -t) unlimited [00:00:01] file size (512-blocks, -f) unlimited [00:00:01] data seg size (kbytes, -d) 33554432 [00:00:01] stack size (kbytes, -s) 524288 [00:00:01] core file size (512-blocks, -c) unlimited [00:00:01] max memory size (kbytes, -m) unlimited [00:00:01] locked memory (kbytes, -l) unlimited [00:00:01] max user processes (-u) 58500 [00:00:01] open files (-n) 8192 [00:00:01] virtual mem size (kbytes, -v) unlimited [00:00:01] swap limit (kbytes, -w) unlimited [00:00:01] socket buffer size (bytes, -b) unlimited [00:00:01] pseudo-terminals (-p) unlimited [00:00:01] kqueues (-k) unlimited [00:00:01] umtx shared locks (-o) unlimited [00:00:01] --End resource limits-- [00:00:01] =================================================== [00:00:01] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:00:01] ===> License BSD2CLAUSE accepted by the user [00:00:01] =========================================================================== [00:00:01] =================================================== [00:00:01] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:00:02] ===> matio-1.5.28 depends on file: /usr/local/sbin/pkg - not found [00:00:02] ===> Installing existing package /packages/All/pkg-1.21.3.pkg [00:00:03] [pkg.mfl.dk] Installing pkg-1.21.3... [00:00:03] [pkg.mfl.dk] Extracting pkg-1.21.3: .......... done [00:00:12] ===> matio-1.5.28 depends on file: /usr/local/sbin/pkg - found [00:00:12] ===> Returning to build of matio-1.5.28 [00:00:12] =========================================================================== [00:00:12] =================================================== [00:00:12] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:00:12] =========================================================================== [00:00:13] =================================================== [00:00:13] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:00:13] ===> License BSD2CLAUSE accepted by the user [00:00:13] => matio-1.5.28.tar.gz doesn't seem to exist in /portdistfiles/. [00:00:14] => Attempting to fetch https://downloads.sourceforge.net/project/matio/matio/1.5.28/matio-1.5.28.tar.gz [00:00:29] matio-1.5.28.tar.gz 9890 kB 333 kBps 30s [00:00:59] ===> Fetching all distfiles required by matio-1.5.28 for building [00:00:59] =========================================================================== [00:00:59] =================================================== [00:00:59] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:00:59] ===> License BSD2CLAUSE accepted by the user [00:00:59] ===> Fetching all distfiles required by matio-1.5.28 for building [00:01:00] => SHA256 Checksum OK for matio-1.5.28.tar.gz. [00:01:00] =========================================================================== [00:01:06] =================================================== [00:01:06] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:01:06] =========================================================================== [00:01:06] =================================================== [00:01:06] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:01:06] ===> License BSD2CLAUSE accepted by the user [00:01:07] ===> Fetching all distfiles required by matio-1.5.28 for building [00:01:07] ===> Extracting for matio-1.5.28 [00:01:08] => SHA256 Checksum OK for matio-1.5.28.tar.gz. [00:01:09] =========================================================================== [00:01:09] =================================================== [00:01:09] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:01:09] =========================================================================== [00:01:09] =================================================== [00:01:09] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:01:10] ===> Patching for matio-1.5.28 [00:01:11] =========================================================================== [00:01:11] =================================================== [00:01:11] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:01:11] ===> matio-1.5.28 depends on file: /usr/local/bin/ccache - not found [00:01:11] ===> Installing existing package /packages/All/ccache-3.7.12_7.pkg [00:01:12] [pkg.mfl.dk] Installing ccache-3.7.12_7... [00:01:12] [pkg.mfl.dk] Extracting ccache-3.7.12_7: .......... done [00:01:12] Create compiler links... [00:01:12] create symlink for cc [00:01:12] create symlink for cc (world) [00:01:13] create symlink for c++ [00:01:13] create symlink for c++ (world) [00:01:13] create symlink for CC [00:01:13] create symlink for CC (world) [00:01:13] create symlink for clang [00:01:13] create symlink for clang (world) [00:01:13] create symlink for clang++ [00:01:13] create symlink for clang++ (world) [00:01:13] ===== [00:01:13] Message from ccache-3.7.12_7: [00:01:13] [00:01:13] -- [00:01:13] NOTE: [00:01:13] Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for [00:01:13] information on using ccache with FreeBSD ports and src. [00:01:13] ===> matio-1.5.28 depends on file: /usr/local/bin/ccache - found [00:01:13] ===> Returning to build of matio-1.5.28 [00:01:13] =========================================================================== [00:01:13] =================================================== [00:01:13] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:01:13] ===> matio-1.5.28 depends on shared library: libhdf5.so - not found [00:01:14] ===> Installing existing package /packages/All/hdf5-1.12.2_2,1.pkg [00:01:14] [pkg.mfl.dk] Installing hdf5-1.12.2_2,1... [00:01:14] [pkg.mfl.dk] `-- Installing gcc13-13.3.0... [00:01:14] [pkg.mfl.dk] | `-- Installing binutils-2.43.1,1... [00:01:14] [pkg.mfl.dk] | | `-- Installing indexinfo-0.3.1... [00:01:14] [pkg.mfl.dk] | | `-- Extracting indexinfo-0.3.1: .... done [00:01:14] [pkg.mfl.dk] | | `-- Installing zstd-1.5.6... [00:01:14] [pkg.mfl.dk] | | `-- Installing liblz4-1.10.0,1... [00:01:14] [pkg.mfl.dk] | | `-- Extracting liblz4-1.10.0,1: .......... done [00:01:15] [pkg.mfl.dk] | | `-- Extracting zstd-1.5.6: .......... done [00:01:16] [pkg.mfl.dk] | `-- Extracting binutils-2.43.1,1: .......... done [00:01:22] [pkg.mfl.dk] | `-- Installing gmp-6.3.0... [00:01:22] [pkg.mfl.dk] | `-- Extracting gmp-6.3.0: .......... done [00:01:24] [pkg.mfl.dk] | `-- Installing mpc-1.3.1_1... [00:01:25] [pkg.mfl.dk] | | `-- Installing mpfr-4.2.1,1... [00:01:25] [pkg.mfl.dk] | | `-- Extracting mpfr-4.2.1,1: .......... done [00:01:27] [pkg.mfl.dk] | `-- Extracting mpc-1.3.1_1: ......... done [00:01:28] [pkg.mfl.dk] `-- Extracting gcc13-13.3.0: .......... done [00:01:44] create symlink for gcc13 [00:01:45] create symlink for gcc13 (world) [00:01:45] create symlink for g++13 [00:01:45] create symlink for g++13 (world) [00:01:45] create symlink for cpp13 [00:01:45] create symlink for cpp13 (world) [00:01:45] [pkg.mfl.dk] `-- Installing libaec-1.1.3... [00:01:45] [pkg.mfl.dk] `-- Extracting libaec-1.1.3: .......... done [00:01:47] [pkg.mfl.dk] Extracting hdf5-1.12.2_2,1: .......... done [00:01:51] ===== [00:01:51] Message from gcc13-13.3.0: [00:01:51] [00:01:51] -- [00:01:51] To ensure binaries built with this toolchain find appropriate versions [00:01:51] of the necessary run-time libraries, you may want to link using [00:01:51] [00:01:51] -Wl,-rpath=/usr/local/lib/gcc13 [00:01:51] [00:01:51] For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens [00:01:51] transparently. [00:01:51] ===> matio-1.5.28 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so) [00:01:51] ===> Returning to build of matio-1.5.28 [00:01:51] =========================================================================== [00:01:51] =================================================== [00:01:51] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:01:51] ===> Configuring for matio-1.5.28 [00:02:11] configure: loading site script /usr/ports/Templates/config.site [00:02:11] checking for a BSD-compatible install... /usr/bin/install -c [00:02:11] checking whether build environment is sane... yes [00:02:11] checking for a race-free mkdir -p... (cached) /bin/mkdir -p [00:02:11] checking for gawk... (cached) /usr/bin/awk [00:02:11] checking whether make sets $(MAKE)... yes [00:02:12] checking whether make supports nested variables... yes [00:02:12] checking whether make supports nested variables... (cached) yes [00:02:12] checking whether to enable maintainer-specific portions of Makefiles... no [00:02:12] checking build system type... amd64-portbld-freebsd14.1 [00:02:12] checking host system type... amd64-portbld-freebsd14.1 [00:02:15] checking whether the C compiler works... yes [00:02:18] checking for C compiler default output file name... a.out [00:02:18] checking for suffix of executables... [00:02:18] checking whether we are cross compiling... no [00:02:19] checking for suffix of object files... o [00:02:20] checking whether the compiler supports GNU C... yes [00:02:20] checking whether cc accepts -g... yes [00:02:20] checking for cc option to enable C11 features... none needed [00:02:21] checking whether cc understands -c and -o together... yes [00:02:22] checking for stdio.h... (cached) yes [00:02:22] checking for stdlib.h... (cached) yes [00:02:22] checking for string.h... (cached) yes [00:02:22] checking for inttypes.h... (cached) yes [00:02:22] checking for stdint.h... (cached) yes [00:02:22] checking for strings.h... (cached) yes [00:02:22] checking for sys/stat.h... (cached) yes [00:02:22] checking for sys/types.h... (cached) yes [00:02:22] checking for unistd.h... (cached) yes [00:02:22] checking for wchar.h... (cached) yes [00:02:22] checking for minix/config.h... (cached) no [00:02:22] checking for stdarg.h... (cached) yes [00:02:22] checking for varargs.h... no [00:02:22] checking whether it is safe to define __EXTENSIONS__... yes [00:02:23] checking whether _XOPEN_SOURCE should be defined... no [00:02:23] checking debug mode... no [00:02:23] checking profile mode... no [00:02:23] checking how to print strings... printf [00:02:23] checking for a sed that does not truncate output... (cached) /usr/bin/sed [00:02:23] checking for grep that handles long lines and -e... (cached) /usr/bin/grep [00:02:23] checking for egrep... (cached) /usr/bin/egrep [00:02:23] checking for fgrep... (cached) /usr/bin/fgrep [00:02:23] checking for ld used by cc... /usr/bin/ld [00:02:23] checking if the linker (/usr/bin/ld) is GNU ld... yes [00:02:23] checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm -B [00:02:24] checking the name lister (/usr/local/bin/nm -B) interface... BSD nm [00:02:25] checking whether ln -s works... yes [00:02:25] checking the maximum length of command line arguments... (cached) 524288 [00:02:25] checking how to convert amd64-portbld-freebsd14.1 file names to amd64-portbld-freebsd14.1 format... func_convert_file_noop [00:02:25] checking how to convert amd64-portbld-freebsd14.1 file names to toolchain format... func_convert_file_noop [00:02:25] checking for /usr/bin/ld option to reload object files... -r [00:02:25] checking for objdump... objdump [00:02:25] checking how to recognize dependent libraries... pass_all [00:02:25] checking for dlltool... no [00:02:25] checking how to associate runtime and link libraries... printf %s\n [00:02:25] checking for ar... ar [00:02:25] checking for archiver @FILE support... no [00:02:25] checking for strip... strip [00:02:25] checking for ranlib... ranlib [00:02:25] checking command to parse /usr/local/bin/nm -B output from cc object... ok [00:02:26] checking for sysroot... no [00:02:26] checking for a working dd... /bin/dd [00:02:27] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 [00:02:27] checking for mt... mt [00:02:27] checking if mt is a manifest tool... no [00:02:27] checking for dlfcn.h... (cached) yes [00:02:27] checking for objdir... .libs [00:02:28] checking if cc supports -fno-rtti -fno-exceptions... yes [00:02:28] checking for cc option to produce PIC... -fPIC -DPIC [00:02:28] checking if cc PIC flag -fPIC -DPIC works... yes [00:02:29] checking if cc static flag -static works... yes [00:02:30] checking if cc supports -c -o file.o... yes [00:02:30] checking if cc supports -c -o file.o... 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(cached) /usr/bin/grep [00:02:31] checking for special C compiler options needed for large files... no [00:02:31] checking for _FILE_OFFSET_BITS value needed for large files... no [00:02:32] checking for large file support in 32-bit OS... yes [00:02:32] checking for fseeko... yes [00:02:32] checking for ftello... yes [00:02:33] checking for fseeko64... no [00:02:33] checking for ftello64... no [00:02:33] checking for _fseeki64... no [00:02:34] checking for _ftelli64... no [00:02:35] checking for pow in -lm... yes [00:02:35] checking for inttypes.h... (cached) yes [00:02:35] checking for stdint.h... (cached) yes [00:02:35] checking for intsafe.h... no [00:02:36] checking for strings.h... (cached) yes [00:02:36] checking for unistd.h... (cached) yes [00:02:36] checking for float.h... (cached) yes [00:02:36] checking for locale.h... (cached) yes [00:02:36] checking for stddef.h... (cached) yes [00:02:36] checking for struct lconv.decimal_point... yes [00:02:36] checking for struct lconv.thousands_sep... yes [00:02:36] checking for ptrdiff_t... (cached) yes [00:02:36] checking for localeconv... yes [00:02:36] checking for getopt_long... system [00:02:37] checking size of double... 8 [00:02:38] checking size of float... 4 [00:02:38] checking size of long long... 8 [00:02:39] checking size of long... 8 [00:02:39] checking size of int... 4 [00:02:40] checking size of short... 2 [00:02:40] checking size of char... 1 [00:02:41] checking size of void *... 8 [00:02:42] checking size of off_t... 8 [00:02:42] checking size of size_t... 8 [00:02:43] checking for mat_int64_t... int64_t [00:02:43] checking for mat_uint64_t... uint64_t [00:02:44] checking for mat_int32_t... int32_t [00:02:44] checking for mat_uint32_t... uint32_t [00:02:44] checking for mat_int16_t... int16_t [00:02:45] checking for mat_uint16_t... uint16_t [00:02:45] checking for mat_int8_t... int8_t [00:02:46] checking for mat_uint8_t... uint8_t [00:02:46] checking for off_t... (cached) yes [00:02:46] checking for off64_t... no [00:02:47] checking for long double... (cached) yes [00:02:47] checking for unsigned long long int... (cached) yes [00:02:47] checking for long long int... (cached) yes [00:02:47] checking for unsigned long long int... (cached) yes [00:02:47] checking for size_t... (cached) yes [00:02:47] checking for intmax_t... (cached) yes [00:02:47] checking for uintmax_t... yes [00:02:48] checking for uintptr_t... (cached) yes [00:02:48] checking for va_copy() function... yes [00:02:48] checking for vsnprintf()... yes [00:02:49] checking for snprintf()... yes [00:02:49] checking for vasprintf()... yes [00:02:50] checking for asprintf()... yes [00:02:50] checking for matlab... no [00:02:50] checking for zlib Library... -lz [00:02:52] checking for HDF5 software... -L/usr/local/lib -lhdf5 [00:02:52] checking if HDF5 interface is >= v1.8... yes [00:02:53] checking enable MAT v7.3 file support... yes [00:02:53] checking for default MAT file version... MAT_FT_MAT5 [00:02:53] checking enable extended sparse types... yes [00:02:54] checking that generated files are newer than configure... done [00:02:54] configure: creating ./config.status [00:03:08] config.status: creating Makefile [00:03:09] config.status: creating matio.pc [00:03:09] config.status: creating snprintf/Makefile [00:03:10] config.status: creating src/Makefile [00:03:10] config.status: creating getopt/Makefile [00:03:11] config.status: creating tools/Makefile [00:03:12] config.status: creating test/Makefile [00:03:13] config.status: creating documentation/Makefile [00:03:14] config.status: creating src/matioConfig.h [00:03:15] config.status: creating src/matio_pubconf.h [00:03:15] config.status: executing libtool commands [00:03:16] config.status: executing test/atconfig commands [00:03:16] [00:03:16] MATIO Configuration Summary [00:03:16] ============================================================== [00:03:16] C Compiler: cc [00:03:16] CFLAGS: -O2 -pipe -fstack-protector-strong -fno-strict-aliasing [00:03:16] Shared Libraries: yes [00:03:16] Static Libraries: yes [00:03:16] default MAT version: MAT_FT_MAT5 [00:03:16] [00:03:16] Features -------------------------------------------- [00:03:16] MAT v7.3 file support: yes [00:03:16] Extended sparse support: yes [00:03:16] [00:03:16] Packages -------------------------------------------- [00:03:16] zlib: -lz [00:03:16] hdf5: -L/usr/local/lib -lhdf5 [00:03:16] MATLAB: [00:03:16] [00:03:16] [00:03:17] =========================================================================== [00:03:17] =================================================== [00:03:17] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:03:17] ===> Building for matio-1.5.28 [00:03:17] Making all in snprintf [00:03:17] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I../src -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o snprintf.lo snprintf.c [00:03:17] libtool: compile: cc -DHAVE_CONFIG_H -I. -I../src -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c snprintf.c -fPIC -DPIC -o .libs/snprintf.o [00:03:18] libtool: compile: cc -DHAVE_CONFIG_H -I. -I../src -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c snprintf.c -o snprintf.o >/dev/null 2>&1 [00:03:18] /bin/sh ../libtool --tag=CC --mode=link cc -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -o libsnprintf.la snprintf.lo -lm [00:03:19] libtool: link: ar cr .libs/libsnprintf.a .libs/snprintf.o [00:03:19] libtool: link: ranlib .libs/libsnprintf.a [00:03:19] libtool: link: ( cd ".libs" && rm -f "libsnprintf.la" && ln -s "../libsnprintf.la" "libsnprintf.la" ) [00:03:20] Making all in src [00:03:20] /usr/bin/make all-am [00:03:20] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o endian.lo endian.c [00:03:20] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c endian.c -fPIC -DPIC -o .libs/endian.o [00:03:21] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c endian.c -o endian.o >/dev/null 2>&1 [00:03:22] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o io.lo io.c [00:03:22] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c io.c -fPIC -DPIC -o .libs/io.o [00:03:23] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c io.c -o io.o >/dev/null 2>&1 [00:03:24] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o inflate.lo inflate.c [00:03:24] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c inflate.c -fPIC -DPIC -o .libs/inflate.o [00:03:26] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c inflate.c -o inflate.o >/dev/null 2>&1 [00:03:27] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o read_data.lo read_data.c [00:03:27] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c read_data.c -fPIC -DPIC -o .libs/read_data.o [00:04:33] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c read_data.c -o read_data.o >/dev/null 2>&1 [00:05:31] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o mat5.lo mat5.c [00:05:32] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c mat5.c -fPIC -DPIC -o .libs/mat5.o [00:06:28] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c mat5.c -o mat5.o >/dev/null 2>&1 [00:07:19] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o mat4.lo mat4.c [00:07:20] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c mat4.c -fPIC -DPIC -o .libs/mat4.o [00:07:21] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c mat4.c -o mat4.o >/dev/null 2>&1 [00:07:23] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o mat.lo mat.c [00:07:24] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c mat.c -fPIC -DPIC -o .libs/mat.o [00:07:28] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c mat.c -o mat.o >/dev/null 2>&1 [00:07:32] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o matvar_cell.lo matvar_cell.c [00:07:32] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c matvar_cell.c -fPIC -DPIC -o .libs/matvar_cell.o [00:07:33] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c matvar_cell.c -o matvar_cell.o >/dev/null 2>&1 [00:07:34] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o matvar_struct.lo matvar_struct.c [00:07:35] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c matvar_struct.c -fPIC -DPIC -o .libs/matvar_struct.o [00:07:36] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c matvar_struct.c -o matvar_struct.o >/dev/null 2>&1 [00:07:37] /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o mat73.lo mat73.c [00:07:38] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c mat73.c -fPIC -DPIC -o .libs/mat73.o [00:07:41] libtool: compile: cc -DHAVE_CONFIG_H -I. -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c mat73.c -o mat73.o >/dev/null 2>&1 [00:07:45] /bin/sh ../libtool --tag=CC --mode=link cc -I. -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -no-undefined -export-symbols ./matio.sym -version-info 13:1:0 -fstack-protector-strong -o libmatio.la -rpath /usr/local/lib endian.lo io.lo inflate.lo read_data.lo mat5.lo mat4.lo mat.lo matvar_cell.lo matvar_struct.lo mat73.lo -L/usr/local/lib -lhdf5 -lz ../snprintf/libsnprintf.la -lm [00:07:47] libtool: link: echo "{ global:" > .libs/libmatio.so.13.0.1-ver [00:07:47] libtool: link: sed -e "s|$|;|" < ./matio.sym >> .libs/libmatio.so.13.0.1-ver [00:07:47] libtool: link: echo "local: *; };" >> .libs/libmatio.so.13.0.1-ver [00:07:47] libtool: link: cc -shared -fPIC -DPIC .libs/endian.o .libs/io.o .libs/inflate.o .libs/read_data.o .libs/mat5.o .libs/mat4.o .libs/mat.o .libs/matvar_cell.o .libs/matvar_struct.o .libs/mat73.o -Wl,--whole-archive ../snprintf/.libs/libsnprintf.a -Wl,--no-whole-archive -L/usr/local/lib -lhdf5 -lz -lm -O2 -fstack-protector-strong -fstack-protector-strong -Wl,-soname -Wl,libmatio.so.13 -Wl,-version-script -Wl,.libs/libmatio.so.13.0.1-ver -o .libs/libmatio.so.13.0.1 [00:07:48] libtool: link: (cd ".libs" && rm -f "libmatio.so.13" && ln -s "libmatio.so.13.0.1" "libmatio.so.13") [00:07:48] libtool: link: (cd ".libs" && rm -f "libmatio.so" && ln -s "libmatio.so.13.0.1" "libmatio.so") [00:07:48] libtool: link: (cd .libs/libmatio.lax/libsnprintf.a && ar x "/wrkdirs/usr/ports/math/matio/work/matio-1.5.28/src/../snprintf/.libs/libsnprintf.a") [00:07:49] libtool: link: ar cr .libs/libmatio.a endian.o io.o inflate.o read_data.o mat5.o mat4.o mat.o matvar_cell.o matvar_struct.o mat73.o .libs/libmatio.lax/libsnprintf.a/snprintf.o [00:07:49] libtool: link: ranlib .libs/libmatio.a [00:07:50] libtool: link: rm -fr .libs/libmatio.lax [00:07:50] libtool: link: ( cd ".libs" && rm -f "libmatio.la" && ln -s "../libmatio.la" "libmatio.la" ) [00:07:50] Making all in tools [00:07:50] cc -DHAVE_CONFIG_H -I. -I../src -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o matdump.o matdump.c [00:07:51] /bin/sh ../libtool --tag=CC --mode=link cc -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -o matdump matdump.o ../src/libmatio.la -L/usr/local/lib -lhdf5 -lz ../snprintf/libsnprintf.la -lm [00:07:53] libtool: link: cc -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -o .libs/matdump matdump.o ../src/.libs/libmatio.so -L/usr/local/lib -lhdf5 -lz ../snprintf/.libs/libsnprintf.a -lm -Wl,-rpath -Wl,/usr/local/lib [00:07:53] Making all in test [00:07:54] cc -DHAVE_CONFIG_H -I. -I../src -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o test_mat.o test_mat.c [00:07:57] /bin/sh ../libtool --tag=CC --mode=link cc -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -L../src -fstack-protector-strong -o test_mat test_mat.o ../src/libmatio.la -L/usr/local/lib -lhdf5 -lz -lm [00:07:59] libtool: link: cc -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -o .libs/test_mat test_mat.o -L../src ../src/.libs/libmatio.so -L/usr/local/lib -lhdf5 -lz -lm -Wl,-rpath -Wl,/usr/local/lib [00:07:59] cc -DHAVE_CONFIG_H -I. -I../src -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -c -o test_snprintf.o test_snprintf.c [00:08:00] /bin/sh ../libtool --tag=CC --mode=link cc -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -L../snprintf -fstack-protector-strong -o test_snprintf test_snprintf.o ../snprintf/libsnprintf.la -lm [00:08:01] libtool: link: cc -I../src -I/usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -o test_snprintf test_snprintf.o -L../snprintf ../snprintf/.libs/libsnprintf.a -lm [00:08:01] Making all in documentation [00:08:02] =========================================================================== [00:08:02] =================================================== [00:08:02] ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 [00:08:02] =========================================================================== [00:08:02] =================================================== [00:08:02] ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 [00:08:02] ===> Staging for matio-1.5.28 [00:08:02] ===> Generating temporary packing list [00:08:03] if test -z 'strip'; then /usr/bin/make INSTALL_PROGRAM="/bin/sh /wrkdirs/usr/ports/math/matio/work/matio-1.5.28/config/install-sh -c -s" install_sh_PROGRAM="/bin/sh /wrkdirs/usr/ports/math/matio/work/matio-1.5.28/config/install-sh -c -s" INSTALL_STRIP_FLAG=-s install; else /usr/bin/make INSTALL_PROGRAM="/bin/sh /wrkdirs/usr/ports/math/matio/work/matio-1.5.28/config/install-sh -c -s" install_sh_PROGRAM="/bin/sh /wrkdirs/usr/ports/math/matio/work/matio-1.5.28/config/install-sh -c -s" INSTALL_STRIP_FLAG=-s "INSTALL_PROGRAM_ENV=STRIPPROG='strip'" install; fi [00:08:03] Making install in snprintf [00:08:03] Making install in src [00:08:03] /bin/mkdir -p '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib' [00:08:03] /bin/sh ../libtool --mode=install /usr/bin/install -c -s libmatio.la '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib' [00:08:04] libtool: install: /usr/bin/install -c .libs/libmatio.so.13.0.1 /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib/libmatio.so.13.0.1 [00:08:04] libtool: install: strip --strip-unneeded /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib/libmatio.so.13.0.1 [00:08:04] libtool: install: (cd /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib && { ln -s -f libmatio.so.13.0.1 libmatio.so.13 || { rm -f libmatio.so.13 && ln -s libmatio.so.13.0.1 libmatio.so.13; }; }) [00:08:04] libtool: install: (cd /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib && { ln -s -f libmatio.so.13.0.1 libmatio.so || { rm -f libmatio.so && ln -s libmatio.so.13.0.1 libmatio.so; }; }) [00:08:04] libtool: install: /usr/bin/install -c .libs/libmatio.lai /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib/libmatio.la [00:08:04] libtool: install: /usr/bin/install -c .libs/libmatio.a /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib/libmatio.a [00:08:04] libtool: install: strip --strip-debug /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib/libmatio.a [00:08:04] libtool: install: chmod 644 /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib/libmatio.a [00:08:04] libtool: install: ranlib /wrkdirs/usr/ports/math/matio/work/stage/usr/local/lib/libmatio.a [00:08:04] ranlib: warning: can't find .strtab section [00:08:04] libtool: warning: remember to run 'libtool --finish /usr/local/lib' [00:08:04] /bin/mkdir -p '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/include' [00:08:04] install -m 0644 matio.h '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/include' [00:08:04] /bin/mkdir -p '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/include' [00:08:05] install -m 0644 matio_pubconf.h '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/include' [00:08:05] Making install in tools [00:08:05] /bin/mkdir -p '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/bin' [00:08:05] STRIPPROG='strip' /bin/sh ../libtool --mode=install /bin/sh /wrkdirs/usr/ports/math/matio/work/matio-1.5.28/config/install-sh -c -s matdump '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/bin' [00:08:05] libtool: warning: '../src/libmatio.la' has not been installed in '/usr/local/lib' [00:08:06] libtool: install: /bin/sh /wrkdirs/usr/ports/math/matio/work/matio-1.5.28/config/install-sh -c -s .libs/matdump /wrkdirs/usr/ports/math/matio/work/stage/usr/local/bin/matdump [00:08:06] Making install in test [00:08:06] Making install in documentation [00:08:06] /bin/mkdir -p '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/share/info' [00:08:06] /bin/mkdir -p '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/share/man/man3' [00:08:07] install -m 0644 Mat_Close.3 Mat_CreateVer.3 Mat_GetDir.3 Mat_GetFileAccessMode.3 Mat_GetFilename.3 Mat_GetHeader.3 Mat_GetLibraryVersion.3 Mat_GetVersion.3 Mat_Open.3 Mat_Rewind.3 Mat_VarAddStructField.3 Mat_VarCreate.3 Mat_VarCreateStruct.3 Mat_VarDelete.3 Mat_VarFree.3 Mat_VarGetNumberOfFields.3 Mat_VarGetSize.3 Mat_VarGetStructFieldnames.3 Mat_VarGetStructs.3 Mat_VarGetStructsLinear.3 Mat_VarRead.3 Mat_VarReadInfo.3 Mat_VarReadNext.3 Mat_VarReadNextInfo.3 Mat_VarPrint.3 Mat_VarWrite.3 Mat_VarWriteAppend.3 '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/share/man/man3' [00:08:08] /bin/mkdir -p '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/libdata/pkgconfig' [00:08:08] install -m 0644 matio.pc '/wrkdirs/usr/ports/math/matio/work/stage/usr/local/libdata/pkgconfig' [00:08:08] ====> Compressing man pages (compress-man) [00:08:09] =========================================================================== [00:08:09] =================================================== [00:08:09] ===== env: 'PKG_NOTES=build_timestamp ports_top_git_hash ports_top_checkout_unclean port_git_hash port_checkout_unclean built_by' 'PKG_NOTE_build_timestamp=2024-11-04T14:15:17+0000' 'PKG_NOTE_ports_top_git_hash=9bc872fbee04' 'PKG_NOTE_ports_top_checkout_unclean=no' 'PKG_NOTE_port_git_hash=5e0e004c7d07' 'PKG_NOTE_port_checkout_unclean=no' 'PKG_NOTE_built_by=poudriere-git-3.4.99.20240811' NO_DEPENDS=yes USER=root UID=0 GID=0 [00:08:09] ===> Building packages for matio-1.5.28 [00:08:12] ===> Building matio-1.5.28 [00:08:17] =========================================================================== [00:08:17] =>> Cleaning up wrkdir [00:08:17] ===> Cleaning for matio-1.5.28 [00:08:19] build of math/matio | matio-1.5.28 ended at Mon Nov 4 15:23:36 CET 2024 [00:08:19] build time: 00:08:31